Mark L , no joy. Thump is unchanged and brutal.
Sorry to hear that you have chronic thump disease. Typically, the 'thump' is a small inrush DC voltage presented to the front end of the amplifier, then amplified, and can be related to a cap charging (or discharging) at turn on (or turn off); it could also be a bad ground.
Does the thump manifest itself on both channels?
Can you bypass the DC Protection board to see if you get turn off thump with preamp connected? With preamp disconnected?
Could the thump be originating in the amp? With the preamp disconnected, with the amp still thump?
Because you described the thump as "brutal" it would suggest to me a turn-on spark. Normally, the small .01uF X-type or Y-type AC rated capacitor will snub this small spark. The Phase Linear amps really benefit from the addition of this cap across the power switch because of the +15 Amp surge across the contacts of the unobtainium switches. The preamps have less surge, of course, but the spark can still be present.
Now, I had a brainstorm... If your preamp is ON all the time and you use a power strip, the preamp power switch contacts are already closed and a snubber cap will have no effect. BUT, is there a cap across the switch on the power strip? That could be the source of the spark into the preamp, and ultimately into the amp.